BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F10LP1|AL426401
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1376 1643 0.0
>3x_Contig1376
Length = 7449
Score = 1643 bits (829), Expect = 0.0
Identities = 829/829 (100%)
Strand = Plus / Minus
Query: 1 gatcgtttggaagggttctccaaacttgaagttggataaattgtctggcacaactaccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4265 gatcgtttggaagggttctccaaacttgaagttggataaattgtctggcacaactaccgc 4206
Query: 61 attggctattgttcttactggtctagtcgcttgtgctgtttacttcatcttcttgtaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4205 attggctattgttcttactggtctagtcgcttgtgctgtttacttcatcttcttgtaccc 4146
Query: 121 atactacagaagaagaatcttgcacagagactggaccctaaaatggtatgatatttacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4145 atactacagaagaagaatcttgcacagagactggaccctaaaatggtatgatatttacag 4086
Query: 181 aggcccaactttctacttcaagtccactgacgacattccacctctacctgctggacaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4085 aggcccaactttctacttcaagtccactgacgacattccacctctacctgctggacaatc 4026
Query: 241 tttaaccattgattactacgaaggtagaagattcgaagatgaaactgccggagatgatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4025 tttaaccattgattactacgaaggtagaagattcgaagatgaaactgccggagatgatga 3966
Query: 301 aacccaaattgaaacttcccacaccgccgatggaagagatactgtagagggacatattga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3965 aacccaaattgaaacttcccacaccgccgatggaagagatactgtagagggacatattga 3906
Query: 361 aattaacgacaaggaatctgtcaaccaaagtatcaaattggtgcaaacagaaactttgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3905 aattaacgacaaggaatctgtcaaccaaagtatcaaattggtgcaaacagaaactttgca 3846
Query: 421 agaagaaaaaccaactaccaaacagctatggtggtcattgctaaaacaaggaccaaagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3845 agaagaaaaaccaactaccaaacagctatggtggtcattgctaaaacaaggaccaaagaa 3786
Query: 481 gtggcctctattactttggttgattgcttctcacggttggactcaagatgttattcattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3785 gtggcctctattactttggttgattgcttctcacggttggactcaagatgttattcattc 3726
Query: 541 tcaggtctacgatacaggtgctttgtcaacagatttcaaggacatgtacaagagatctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3725 tcaggtctacgatacaggtgctttgtcaacagatttcaaggacatgtacaagagatctgc 3666
Query: 601 cttctatgacaacagaatcgaattcatctattctatcttgcaagctattaccgccgccac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3665 cttctatgacaacagaatcgaattcatctattctatcttgcaagctattaccgccgccac 3606
Query: 661 tatgtcttttgctcacggtgccaatgatgttgccaacgccactgcaccactagctgccgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3605 tatgtcttttgctcacggtgccaatgatgttgccaacgccactgcaccactagctgccgt 3546
Query: 721 gtatgacatctggcagaaaaacactgtggaatctaagtctgacgttcacacatgggtttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3545 gtatgacatctggcagaaaaacactgtggaatctaagtctgacgttcacacatgggtttt 3486
Query: 781 agcatactgtgccgctgcattggtcctcggttgttggacatacggttac 829
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3485 agcatactgtgccgctgcattggtcctcggttgttggacatacggttac 3437
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6135
Number of Sequences: 1807
Number of extensions: 6135
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)